LibGuides: COVID-19: Research Data

Find Data in PubMed and PMC

Looking for journal articles with associated data sets? New search filters in PubMed and PubMed Central (PMC) aim to increase the discoverability of articles and citations with associated data.

PubMed
Users can search on or append searches with data[filter] to find citations with associated data links.

Example: Covid-19 AND data[filter]

PubMed Central (PMC)
Users can now search on or append searches with filters to discover articles with specific types of associated data.

Use has suppdata[filter] to find articles that include a data availability or data accessibility statement.
Use has data citations[filter] to find articles that include data citation(s).
Use has suppdata[filter] to find articles with associated supplementary material.

Alternatively, use has associated data[filter] to find articles with any type of data described above.

Datasets

Vivli COVID-19 Portal
Clinical trial data; all fees for sharing, anonymizing, accessing, and analyzing data waived for a limited time.
The COVID Tracking Project
Collects and publishes the most complete testing data available for US states and territories.
ICPSR COVID-19 Data Repository
A free self-publishing option for any researcher who wants to share data related to COVID-19; licenses vary for distribution of data.
NCBI Virus SARS-CoV-2 Data
Genomic data from GenBank.
New York Times COVID-19 Data in the U.S.
A series of data files with cumulative counts of coronavirus cases in the U.S., at the state and county level, over time.
Nextstrain Genomic Epidemiology of Novel Coronavirus
This phylogeny shows evolutionary relationships (mutations) of hCoV-19 (or SARS-CoV-2) viruses from the ongoing novel coronavirus COVID-19 pandemic.
Oxford COVID-19 Government Response Tracker
Tracks and compares government responses to the coronavirus outbreak worldwide.
USAFacts Stats and Data
Information on all things relative to COVID-19, including risk factors and national spending on healthcare services.

Dashboards and Reports

COVID-19 North Carolina Dashboard
NCDHHS data by county, including patient-level data such as age, race/ethnicity, and gender.
COVID-19 Global Cases Dashboard
Created by Johns Hopkins University
WHO COVID-19 Dashboard
Data by country and region.
Tableau COVID-19 Data Hub
Dynamic COVID-19 visualizations from various sources.
COVID-19 Projections
Projection of deaths and hospital resources needed by country and state (U.S.).
Data for Black Lives COVID-19 Open Data by State
States reporting COVID-19 cases by race.
COVID Racial Data Tracker
A collaboration between the COVID Tracking Project and the Antiracist Research & Policy Center to gather the most complete race and ethnicity data on COVID-19 in the U.S.

Clinical Trials and Patents

ClinicalTrials.gov Search
Information on global COVID-19 clinical trials.
COVID-19 Open Patent Dataset
Free datasets of patent documents, scholarly research works metadata, and biological sequences from patents.

COVID-19 Evidence Synthesis Research

COVID-END
The COVID-19 Evidence Network to support Decision-making (COVID-END) helps researchers find and use the best available evidence, and also helps researchers avoid waste by reducing duplication and better coordinating the COVID-19 evidence syntheses, technology assessments and guidelines being produced.

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